BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C09LP1|AL429714
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1681 0.0
>3x_Contig1555
Length = 10828
Score = 1681 bits (848), Expect = 0.0
Identities = 848/848 (100%)
Strand = Plus / Minus
Query: 5 gcgaaaattaaatgaacgttgtgtcaaggtgcaaagtgtactctttggaccaatttacaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6621 gcgaaaattaaatgaacgttgtgtcaaggtgcaaagtgtactctttggaccaatttacaa 6562
Query: 65 gtccataccagtatacatgcgaagtcaacggtaagaaatgtaccaggattcacgtcgtac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6561 gtccataccagtatacatgcgaagtcaacggtaagaaatgtaccaggattcacgtcgtac 6502
Query: 125 aggaatctctgcgaggaaacggtaaaacaagaaccatagtgaacacagtgcgcgaacaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6501 aggaatctctgcgaggaaacggtaaaacaagaaccatagtgaacacagtgcgcgaacaat 6442
Query: 185 gtgaggggaacggactaatcttgaacatttcttcgatgccccggaacgaccacaacgaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6441 gtgaggggaacggactaatcttgaacatttcttcgatgccccggaacgaccacaacgaca 6382
Query: 245 atgacttgctcgaaacatacccggaattccaacagactaatctttccatgcttcagttcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6381 atgacttgctcgaaacatacccggaattccaacagactaatctttccatgcttcagttcg 6322
Query: 305 attcctttattcaatttatgtctcaattatgtacagatcccgtgaccgcattgtctagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6321 attcctttattcaatttatgtctcaattatgtacagatcccgtgaccgcattgtctagat 6262
Query: 365 gccaaccgcagaattcggaaacgtctacatcgaagcagttggcatgggtcctcattgata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6261 gccaaccgcagaattcggaaacgtctacatcgaagcagttggcatgggtcctcattgata 6202
Query: 425 atttgtcgcacttatccatggaccccaaattcgacgccaagttgctcaacagatcaatta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6201 atttgtcgcacttatccatggaccccaaattcgacgccaagttgctcaacagatcaatta 6142
Query: 485 gactcgtacaacagactttcggttctgtcgttatctctacaagtttgcccttatcgttcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6141 gactcgtacaacagactttcggttctgtcgttatctctacaagtttgcccttatcgttcc 6082
Query: 545 atggtggtatagaaagcacgtttaaacatcaatcaacaaaatgtgcaagtggtgaccgtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6081 atggtggtatagaaagcacgtttaaacatcaatcaacaaaatgtgcaagtggtgaccgtc 6022
Query: 605 tgttaccctatttcaatgaatccgacattatcctataagctctacaaaacgctgtgctag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6021 tgttaccctatttcaatgaatccgacattatcctataagctctacaaaacgctgtgctag 5962
Query: 665 aaaccgtgttgccctactatgtgatcttctcatctctgcatggcaaaaggacatggttct 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5961 aaaccgtgttgccctactatgtgatcttctcatctctgcatggcaaaaggacatggttct 5902
Query: 725 gtctacaccaaacaattttttttttttttcatgcatttttgaacatggaaaaacgttaaa 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5901 gtctacaccaaacaattttttttttttttcatgcatttttgaacatggaaaaacgttaaa 5842
Query: 785 gaattacgaaatgacattccaattgaagttatgatacaggttctaatcgatactgttaac 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5841 gaattacgaaatgacattccaattgaagttatgatacaggttctaatcgatactgttaac 5782
Query: 845 atccttgt 852
||||||||
Sbjct: 5781 atccttgt 5774
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,724
Number of Sequences: 1807
Number of extensions: 13724
Number of successful extensions: 359
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)